J3_8UU6_015
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- 8UU6|1|a|U|1221
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UU6_015 not in the Motif Atlas
- Homologous match to J3_4LFB_005
- Geometric discrepancy: 0.1365
- The information below is about J3_4LFB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UU6|1|a|C|999
8UU6|1|a|U|1000
8UU6|1|a|U|1001
8UU6|1|a|G|1002
*
8UU6|1|a|C|1054
8UU6|1|a|A|1055
8UU6|1|a|G|1056
*
8UU6|1|a|C|1217
8UU6|1|a|U|1218
8UU6|1|a|U|1219
8UU6|1|a|A|1220
8UU6|1|a|U|1221
8UU6|1|a|G|1222
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- Small ribosomal subunit protein uS14
Coloring options: