J3_8UU8_031
3D structure
- PDB id
- 8UU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUACCAG*CUGGGCUAC
- Length
- 33 nucleotides
- Bulged bases
- 8UU8|1|a|A|984, 8UU8|1|a|G|985, 8UU8|1|a|A|987, 8UU8|1|a|C|993, 8UU8|1|a|C|994, 8UU8|1|a|U|1226, 8UU8|1|a|G|1227, 8UU8|1|a|C|1230
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU8|1|a|G|963
8UU8|1|a|U|964
8UU8|1|a|U|965
8UU8|1|a|U|966
8UU8|1|a|A|967
8UU8|1|a|A|968
8UU8|1|a|U|969
8UU8|1|a|U|970
8UU8|1|a|C|971
*
8UU8|1|a|G|982
8UU8|1|a|A|983
8UU8|1|a|A|984
8UU8|1|a|G|985
8UU8|1|a|A|986
8UU8|1|a|A|987
8UU8|1|a|C|988
8UU8|1|a|C|989
8UU8|1|a|U|990
8UU8|1|a|U|991
8UU8|1|a|A|992
8UU8|1|a|C|993
8UU8|1|a|C|994
8UU8|1|a|A|995
8UU8|1|a|G|996
*
8UU8|1|a|C|1225
8UU8|1|a|U|1226
8UU8|1|a|G|1227
8UU8|1|a|G|1228
8UU8|1|a|G|1229
8UU8|1|a|C|1230
8UU8|1|a|U|1231
8UU8|1|a|A|1232
8UU8|1|a|C|1233
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain j
- Small ribosomal subunit protein uS10
- Chain m
- Small ribosomal subunit protein uS13
- Chain n
- Small ribosomal subunit protein uS14
- Chain s
- Small ribosomal subunit protein uS19
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