J3_8UVS_001
3D structure
- PDB id
- 8UVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- CGAGCUA*UAG*CGAG
- Length
- 14 nucleotides
- Bulged bases
- 8UVS|1|1A|G|686, 8UVS|1|1A|G|792
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UVS_001 not in the Motif Atlas
- Homologous match to J3_9DFE_007
- Geometric discrepancy: 0.0527
- The information below is about J3_9DFE_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
8UVS|1|1A|C|683
8UVS|1|1A|G|684
8UVS|1|1A|A|685
8UVS|1|1A|G|686
8UVS|1|1A|C|687
8UVS|1|1A|U|688
8UVS|1|1A|A|689
*
8UVS|1|1A|U|773
8UVS|1|1A|A|774
8UVS|1|1A|G|775
*
8UVS|1|1A|C|791
8UVS|1|1A|G|792
8UVS|1|1A|A|793
8UVS|1|1A|G|794
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1D
- 50S ribosomal protein L2
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