J3_8UXB_028

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

8UXB|1|2|U|1212, 8UXB|1|2|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8UXB_028 not in the Motif Atlas

Geometric match to J3_4LFB_005

Geometric discrepancy: 0.2188

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

8UXB|1|2|C|990
8UXB|1|2|U|991
8UXB|1|2|U|992
8UXB|1|2|G|993
*
8UXB|1|2|C|1045
8UXB|1|2|A|1046
8UXB|1|2|G|1047
*
8UXB|1|2|C|1210
8UXB|1|2|U|1211
8UXB|1|2|U|1212
8UXB|1|2|A|1213
8UXB|1|2|C|1214
8UXB|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14