J3_8UZ3_023

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

8UZ3|1|2|C|1378, 8UZ3|1|2|U|1381, 8UZ3|1|2|C|1382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UZ3|1|2|G|933
8UZ3|1|2|C|934
8UZ3|1|2|A|935
8UZ3|1|2|C|936
8UZ3|1|2|A|937
8UZ3|1|2|A|938
8UZ3|1|2|G|939
*
8UZ3|1|2|C|1344
8UZ3|1|2|U|1345
8UZ3|1|2|A|1346
8UZ3|1|2|G|1347
8UZ3|1|2|U|1348
8UZ3|1|2|A|1349
8UZ3|1|2|A|1350
*
8UZ3|1|2|U|1372
8UZ3|1|2|G|1373
8UZ3|1|2|A|1374
8UZ3|1|2|A|1375
8UZ3|1|2|U|1376
8UZ3|1|2|A|1377
8UZ3|1|2|C|1378
8UZ3|1|2|G|1379
8UZ3|1|2|U|1380
8UZ3|1|2|U|1381
8UZ3|1|2|C|1382
8UZ3|1|2|C|1383
8UZ3|1|2|C|1384

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain l

30S ribosomal protein S7

Chain n

30S ribosomal protein S9