J3_8V9K_025

3D structure

PDB id

8V9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

8V9K|1|A|U|330, 8V9K|1|A|U|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9K|1|A|U|325
8V9K|1|A|A|326
8V9K|1|A|U|327
8V9K|1|A|C|328
8V9K|1|A|U|329
8V9K|1|A|U|330
8V9K|1|A|U|331
*
8V9K|1|A|A|350
8V9K|1|A|G|351
8V9K|1|A|G|352
*
8V9K|1|A|C|443
8V9K|1|A|U|444
8V9K|1|A|U|445
8V9K|1|A|G|446
8V9K|1|A|A|447
8V9K|1|A|U|448
8V9K|1|A|G|449
8V9K|1|A|G|450

Current chains

Chain A

23S Ribosomal RNA

Nearby chains