J3_8V9K_030
3D structure
- PDB id
- 8V9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUUAAC*GGGGAAUAUUG*CAGC
- Length
- 22 nucleotides
- Bulged bases
- 8V9K|1|a|U|52, 8V9K|1|a|A|55, 8V9K|1|a|U|368
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V9K|1|a|G|50
8V9K|1|a|C|51
8V9K|1|a|U|52
8V9K|1|a|U|53
8V9K|1|a|A|54
8V9K|1|a|A|55
8V9K|1|a|C|56
*
8V9K|1|a|G|359
8V9K|1|a|G|360
8V9K|1|a|G|361
8V9K|1|a|G|362
8V9K|1|a|A|363
8V9K|1|a|A|364
8V9K|1|a|U|365
8V9K|1|a|A|366
8V9K|1|a|U|367
8V9K|1|a|U|368
8V9K|1|a|G|369
*
8V9K|1|a|C|392
8V9K|1|a|A|393
8V9K|1|a|G|394
8V9K|1|a|C|395
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
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