J3_8VK7_006

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

8VK7|1|A|U|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK7|1|A|U|325
8VK7|1|A|A|326
8VK7|1|A|U|327
8VK7|1|A|C|328
8VK7|1|A|U|329
8VK7|1|A|U|330
8VK7|1|A|U|331
*
8VK7|1|A|A|350
8VK7|1|A|G|351
8VK7|1|A|G|352
*
8VK7|1|A|C|443
8VK7|1|A|U|444
8VK7|1|A|U|445
8VK7|1|A|G|446
8VK7|1|A|A|447
8VK7|1|A|U|448
8VK7|1|A|G|449
8VK7|1|A|G|450

Current chains

Chain A

23S ribosomal RNA

Nearby chains