J3_8VK7_007

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UAGCGGAAA*UGCCGUAGAC*GGUACGUGAAA

Length

30 nucleotides

Bulged bases

8VK7|1|A|U|403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK7|1|A|U|374
8VK7|1|A|A|375
8VK7|1|A|G|376
8VK7|1|A|C|377
8VK7|1|A|G|378
8VK7|1|A|G|379
8VK7|1|A|A|380
8VK7|1|A|A|381
8VK7|1|A|A|382
*
8VK7|1|A|U|398
8VK7|1|A|G|399
8VK7|1|A|C|400
8VK7|1|A|C|401
8VK7|1|A|G|402
8VK7|1|A|U|403
8VK7|1|A|A|404
8VK7|1|A|G|405
8VK7|1|A|A|406
8VK7|1|A|C|407
*
8VK7|1|A|G|419
8VK7|1|A|G|420
8VK7|1|A|U|421
8VK7|1|A|A|422
8VK7|1|A|C|423
8VK7|1|A|G|424
8VK7|1|A|U|425
8VK7|1|A|G|426
8VK7|1|A|A|427
8VK7|1|A|A|428
8VK7|1|A|A|429

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S Ribosomal Protein L4

Chain V

50S ribosomal protein L24