J3_8VOP_034
3D structure
- PDB id
- 8VOP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 36 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 8VOP|1|a|U|2833, 8VOP|1|a|A|2835, 8VOP|1|a|U|2884
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VOP|1|a|G|2812
8VOP|1|a|A|2813
8VOP|1|a|A|2814
8VOP|1|a|C|2815
*
8VOP|1|a|G|2831
8VOP|1|a|U|2832
8VOP|1|a|U|2833
8VOP|1|a|G|2834
8VOP|1|a|A|2835
8VOP|1|a|U|2836
*
8VOP|1|a|A|2882
8VOP|1|a|A|2883
8VOP|1|a|U|2884
8VOP|1|a|G|2885
8VOP|1|a|A|2886
8VOP|1|a|A|2887
8VOP|1|a|C|2888
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
- Chain j
- 50S ribosomal protein L3
- Chain w
- 50S ribosomal protein L17
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