3D structure

PDB id
8VTW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.35 Å

Loop

Sequence
CAC*GGUAAG*CGAGG
Length
14 nucleotides
Bulged bases
8VTW|1|1A|A|2790
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_90771.1
Basepair signature
cWW-F-cWW-tWH-F-F-tHS-cWW
Number of instances in this motif group
2

Unit IDs

8VTW|1|1A|C|2789
8VTW|1|1A|A|2790
8VTW|1|1A|C|2791
*
8VTW|1|1A|G|2805
8VTW|1|1A|G|2807
8VTW|1|1A|U|2808
8VTW|1|1A|A|2809
8VTW|1|1A|A|2810
8VTW|1|1A|G|2811
*
8VTW|1|1A|C|2889
8VTW|1|1A|G|2891
8VTW|1|1A|A|2892
8VTW|1|1A|G|2893
8VTW|1|1A|G|2894

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1E
50S ribosomal protein L3
Chain 1W
50S ribosomal protein L22

Coloring options:

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