J3_8VV4_020

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGG*CUUGA*UGACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|2|C|586
8VV4|1|2|G|587
8VV4|1|2|G|588
*
8VV4|1|2|C|651
8VV4|1|2|U|652
8VV4|1|2|U|653
8VV4|1|2|G|654
8VV4|1|2|A|655
*
8VV4|1|2|U|751
8VV4|1|2|G|752
8VV4|1|2|A|753
8VV4|1|2|C|754
8VV4|1|2|G|755

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S8

Chain q

Small ribosomal subunit protein uS12

Chain t

Small ribosomal subunit protein uS15

Chain v

Small ribosomal subunit protein uS17