J3_8VVQ_010

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

8VVQ|1|WA|U|1999

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|G|1971
8VVQ|1|WA|A|1972
8VVQ|1|WA|U|1973
8VVQ|1|WA|G|1974
*
8VVQ|1|WA|C|1996
8VVQ|1|WA|G|1997
8VVQ|1|WA|C|1998
8VVQ|1|WA|U|1999
8VVQ|1|WA|A|2000
8VVQ|1|WA|A|2001
8VVQ|1|WA|G|2002
8VVQ|1|WA|G|2003
*
8VVQ|1|WA|C|2018
8VVQ|1|WA|A|2019
8VVQ|1|WA|C|2020

Current chains

Chain WA

28S rRNA

Nearby chains

Chain RA

L12

Chain b

RPLP0