J3_8VVQ_029
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGGA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 8VVQ|1|ZA|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVQ|1|ZA|U|682
8VVQ|1|ZA|G|683
8VVQ|1|ZA|G|684
8VVQ|1|ZA|A|685
*
8VVQ|1|ZA|U|917
8VVQ|1|ZA|U|918
8VVQ|1|ZA|A|919
8VVQ|1|ZA|A|920
8VVQ|1|ZA|G|921
8VVQ|1|ZA|A|922
8VVQ|1|ZA|G|923
*
8VVQ|1|ZA|C|1019
8VVQ|1|ZA|A|1020
8VVQ|1|ZA|U|1021
8VVQ|1|ZA|U|1022
8VVQ|1|ZA|A|1023
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain BC
- S27
- Chain HB
- eS7
- Chain LB
- S11
- Chain NB
- uS15
- Chain WB
- S15A
- Chain XB
- S23
Coloring options: