J3_8VVR_034

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCUUAG*CGAGAC*GCAAUA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|U|1340
8VVR|1|ZA|C|1341
8VVR|1|ZA|U|1342
8VVR|1|ZA|U|1343
8VVR|1|ZA|A|1344
8VVR|1|ZA|G|1345
*
8VVR|1|ZA|C|1384
8VVR|1|ZA|G|1385
8VVR|1|ZA|A|1386
8VVR|1|ZA|G|1387
8VVR|1|ZA|A|1388
8VVR|1|ZA|C|1389
*
8VVR|1|ZA|G|1481
8VVR|1|ZA|C|1482
8VVR|1|ZA|A|1483
8VVR|1|ZA|A|1484
8VVR|1|ZA|U|1485
8VVR|1|ZA|A|1486

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CB

eS1

Chain DB

S3

Chain DC

uS14

Chain QB

uS9

Chain RB

eS17

Chain UB

uS10