J3_8VVT_006

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUC*GCCGG*CCACGCGUCCCCCGCG

Length

24 nucleotides

Bulged bases

8VVT|1|WA|C|1243, 8VVT|1|WA|G|1277, 8VVT|1|WA|C|1278

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|988
8VVT|1|WA|U|989
8VVT|1|WA|C|990
*
8VVT|1|WA|G|1076
8VVT|1|WA|C|1077
8VVT|1|WA|C|1078
8VVT|1|WA|G|1079
8VVT|1|WA|G|1080
*
8VVT|1|WA|C|1242
8VVT|1|WA|C|1243
8VVT|1|WA|A|1244
8VVT|1|WA|C|1245
8VVT|1|WA|G|1250
8VVT|1|WA|C|1251
8VVT|1|WA|G|1252
8VVT|1|WA|U|1253
8VVT|1|WA|C|1254
8VVT|1|WA|C|1255
8VVT|1|WA|C|1256
8VVT|1|WA|C|1257
8VVT|1|WA|C|1258
8VVT|1|WA|G|1277
8VVT|1|WA|C|1278
8VVT|1|WA|G|1279

Current chains

Chain WA

28S rRNA

Nearby chains

Chain AA

eL29

Chain C

uL4

Chain E

L6

Chain F

uL30