J3_8VVT_009

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

8VVT|1|WA|A|1810, 8VVT|1|WA|U|1839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|U|1731
8VVT|1|WA|U|1732
*
8VVT|1|WA|A|1807
8VVT|1|WA|G|1808
8VVT|1|WA|A|1809
8VVT|1|WA|A|1810
8VVT|1|WA|G|1811
*
8VVT|1|WA|C|1837
8VVT|1|WA|G|1838
8VVT|1|WA|U|1839
8VVT|1|WA|G|1840
8VVT|1|WA|G|1841
8VVT|1|WA|A|1842

Current chains

Chain WA

28S rRNA

Nearby chains

Chain AA

eL29

Chain F

uL30

Chain S

eL21