J3_8VVT_010

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|G|1974
8VVT|1|WA|A|1975
8VVT|1|WA|U|1976
8VVT|1|WA|G|1977
*
8VVT|1|WA|C|1999
8VVT|1|WA|G|2000
8VVT|1|WA|C|2001
8VVT|1|WA|U|2002
8VVT|1|WA|A|2003
8VVT|1|WA|A|2004
8VVT|1|WA|G|2005
8VVT|1|WA|G|2006
*
8VVT|1|WA|C|2021
8VVT|1|WA|A|2022
8VVT|1|WA|C|2023

Current chains

Chain WA

28S rRNA

Nearby chains

Chain QA

uL10

Chain RA

uL3