J3_8VVT_014
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGA(PSU)
- Length
- 26 nucleotides
- Bulged bases
- 8VVT|1|WA|C|2475, 8VVT|1|WA|A|2477, 8VVT|1|WA|G|2480, 8VVT|1|WA|C|2510
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|A|2456
8VVT|1|WA|G|2457
8VVT|1|WA|A|2458
8VVT|1|WA|U|2459
8VVT|1|WA|G|2460
8VVT|1|WA|G|2461
*
8VVT|1|WA|C|2470
8VVT|1|WA|G|2471
8VVT|1|WA|U|2472
8VVT|1|WA|U|2473
8VVT|1|WA|C|2474
8VVT|1|WA|C|2475
8VVT|1|WA|G|2476
8VVT|1|WA|A|2477
8VVT|1|WA|A|2478
8VVT|1|WA|G|2479
8VVT|1|WA|G|2480
8VVT|1|WA|G|2481
*
8VVT|1|WA|C|2506
8VVT|1|WA|A|2507
8VVT|1|WA|G|2508
8VVT|1|WA|C|2509
8VVT|1|WA|C|2510
8VVT|1|WA|G|2511
8VVT|1|WA|A|2512
8VVT|1|WA|PSU|2513
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- L8
- Chain G
- eL8
- Chain IA
- L37
- Chain M
- L15
- Chain W
- uL23
- Chain YA
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: