J3_8VVT_017
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAA(B8W)*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 8VVT|1|WA|C|4121, 8VVT|1|WA|U|4122, 8VVT|1|WA|U|4123, 8VVT|1|WA|G|4126
- QA status
- Modified nucleotides: B8W
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|G|4096
8VVT|1|WA|G|4097
8VVT|1|WA|G|4098
8VVT|1|WA|G|4099
*
8VVT|1|WA|C|4119
8VVT|1|WA|G|4120
8VVT|1|WA|C|4121
8VVT|1|WA|U|4122
8VVT|1|WA|U|4123
8VVT|1|WA|C|4124
8VVT|1|WA|U|4125
8VVT|1|WA|G|4126
8VVT|1|WA|G|4127
8VVT|1|WA|C|4128
8VVT|1|WA|G|4129
8VVT|1|WA|C|4130
8VVT|1|WA|C|4131
8VVT|1|WA|A|4132
8VVT|1|WA|A|4133
8VVT|1|WA|B8W|4134
*
8VVT|1|WA|C|4160
8VVT|1|WA|G|4161
8VVT|1|WA|A|4162
8VVT|1|WA|C|4163
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- L8
- Chain BA
- eL30
- Chain FA
- eL34
- Chain G
- eL8
- Chain OA
- eL43
- Chain Y
- L27
Coloring options: