J3_8VVT_022

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

8VVT|1|WA|U|4994, 8VVT|1|WA|C|4995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|4975
8VVT|1|WA|A|4976
8VVT|1|WA|U|4977
*
8VVT|1|WA|G|4991
8VVT|1|WA|C|4992
8VVT|1|WA|U|4993
8VVT|1|WA|U|4994
8VVT|1|WA|C|4995
8VVT|1|WA|U|4996
*
8VVT|1|WA|A|5065
8VVT|1|WA|A|5066
8VVT|1|WA|G|5067
8VVT|1|WA|G|5068

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain CA

eL31

Chain O

uL22