J3_8VVT_028

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

8VVT|1|ZA|C|1138, 8VVT|1|ZA|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|C|1094
8VVT|1|ZA|U|1095
8VVT|1|ZA|G|1096
*
8VVT|1|ZA|U|1136
8VVT|1|ZA|U|1137
8VVT|1|ZA|C|1138
8VVT|1|ZA|C|1139
8VVT|1|ZA|G|1140
*
8VVT|1|ZA|C|1147
8VVT|1|ZA|A|1148
8VVT|1|ZA|A|1149
8VVT|1|ZA|A|1150
8VVT|1|ZA|G|1151

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain AB

uS2

Chain AC

eS26

Chain BC

S27

Chain VB

eS21

Chain WB

S15A