J3_8VVU_005

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

8VVU|1|WA|C|705

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|C|451
8VVU|1|WA|A|452
8VVU|1|WA|G|453
8VVU|1|WA|U|454
8VVU|1|WA|C|455
*
8VVU|1|WA|G|702
8VVU|1|WA|U|703
8VVU|1|WA|G|704
8VVU|1|WA|C|705
8VVU|1|WA|G|706
*
8VVU|1|WA|C|1294
8VVU|1|WA|G|1295
8VVU|1|WA|A|1296
8VVU|1|WA|U|1297
8VVU|1|WA|G|1298

Current chains

Chain WA

28S rRNA

Nearby chains

Chain DA

L32

Chain E

L6

Chain EA

eL33

Chain PA

L28