J3_8VVU_019

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

8VVU|1|WA|U|4376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|G|4230
8VVU|1|WA|U|4231
8VVU|1|WA|C|4232
*
8VVU|1|WA|G|4333
8VVU|1|WA|C|4334
8VVU|1|WA|C|4335
8VVU|1|WA|U|4336
8VVU|1|WA|C|4337
8VVU|1|WA|A|4338
8VVU|1|WA|C|4339
8VVU|1|WA|G|4340
8VVU|1|WA|A|4341
8VVU|1|WA|U|4342
8VVU|1|WA|C|4343
8VVU|1|WA|C|4344
*
8VVU|1|WA|G|4372
8VVU|1|WA|G|4373
8VVU|1|WA|U|4374
8VVU|1|WA|G|4375
8VVU|1|WA|U|4376
8VVU|1|WA|C|4377

Current chains

Chain WA

28S rRNA

Nearby chains

Chain NA

eL42

Chain P

eL18

Chain S

eL21

Chain TA

Transfer RNA; tRNA

Chain Z

L27A