J3_8VVU_027

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGGA*UUAAGAG*CAUUA

Length

16 nucleotides

Bulged bases

8VVU|1|ZA|G|921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|U|682
8VVU|1|ZA|G|683
8VVU|1|ZA|G|684
8VVU|1|ZA|A|685
*
8VVU|1|ZA|U|917
8VVU|1|ZA|U|918
8VVU|1|ZA|A|919
8VVU|1|ZA|A|920
8VVU|1|ZA|G|921
8VVU|1|ZA|A|922
8VVU|1|ZA|G|923
*
8VVU|1|ZA|C|1019
8VVU|1|ZA|A|1020
8VVU|1|ZA|U|1021
8VVU|1|ZA|U|1022
8VVU|1|ZA|A|1023

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain BC

S27

Chain HB

eS7

Chain LB

S11

Chain NB

uS15

Chain WB

S15A

Chain XB

S23