J3_8VVV_010

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

8VVV|1|5|A|1811, 8VVV|1|5|U|1840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|5|U|1732
8VVV|1|5|U|1733
*
8VVV|1|5|A|1808
8VVV|1|5|G|1809
8VVV|1|5|A|1810
8VVV|1|5|A|1811
8VVV|1|5|G|1812
*
8VVV|1|5|C|1838
8VVV|1|5|G|1839
8VVV|1|5|U|1840
8VVV|1|5|G|1841
8VVV|1|5|G|1842
8VVV|1|5|A|1843

Current chains

Chain 5

28S rRNA

Nearby chains

Chain F

uL30

Chain T

eL21

Chain b

eL29