J3_8WV1_001
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GCC*GGUGAAAAGAAC*GAGUGAAAUAGAGCC
- Length
- 30 nucleotides
- Bulged bases
- 8WV1|1|A|U|529, 8WV1|1|A|G|533, 8WV1|1|A|C|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|G|30
8WV1|1|A|C|31
8WV1|1|A|C|32
*
8WV1|1|A|G|499
8WV1|1|A|G|500
8WV1|1|A|U|501
8WV1|1|A|G|502
8WV1|1|A|A|503
8WV1|1|A|A|504
8WV1|1|A|A|505
8WV1|1|A|A|506
8WV1|1|A|G|507
8WV1|1|A|A|508
8WV1|1|A|A|509
8WV1|1|A|C|510
*
8WV1|1|A|G|521
8WV1|1|A|A|522
8WV1|1|A|G|523
8WV1|1|A|U|524
8WV1|1|A|G|525
8WV1|1|A|A|526
8WV1|1|A|A|527
8WV1|1|A|A|528
8WV1|1|A|U|529
8WV1|1|A|A|530
8WV1|1|A|G|531
8WV1|1|A|A|532
8WV1|1|A|G|533
8WV1|1|A|C|534
8WV1|1|A|C|535
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain P
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L22
- Chain S
- 50S ribosomal protein L23
- Chain T
- Large ribosomal subunit protein uL24
Coloring options: