J3_8WV1_002
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CUCGGC*GACCGAUAGCGCACCAGUAC*GGAAAG
- Length
- 32 nucleotides
- Bulged bases
- 8WV1|1|A|A|469, 8WV1|1|A|U|474, 8WV1|1|A|C|482
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|C|32
8WV1|1|A|U|33
8WV1|1|A|C|34
8WV1|1|A|G|35
8WV1|1|A|G|36
8WV1|1|A|C|37
*
8WV1|1|A|G|468
8WV1|1|A|A|469
8WV1|1|A|C|470
8WV1|1|A|C|471
8WV1|1|A|G|472
8WV1|1|A|A|473
8WV1|1|A|U|474
8WV1|1|A|A|475
8WV1|1|A|G|476
8WV1|1|A|C|477
8WV1|1|A|G|478
8WV1|1|A|C|479
8WV1|1|A|A|480
8WV1|1|A|C|481
8WV1|1|A|C|482
8WV1|1|A|A|483
8WV1|1|A|G|484
8WV1|1|A|U|485
8WV1|1|A|A|486
8WV1|1|A|C|487
*
8WV1|1|A|G|494
8WV1|1|A|G|495
8WV1|1|A|A|496
8WV1|1|A|A|497
8WV1|1|A|A|498
8WV1|1|A|G|499
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L22
- Chain S
- 50S ribosomal protein L23
- Chain T
- Large ribosomal subunit protein uL24
Coloring options: