J3_8WV1_008

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

8WV1|1|A|A|1134

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|G|1101
8WV1|1|A|G|1102
8WV1|1|A|A|1103
*
8WV1|1|A|U|1127
8WV1|1|A|U|1128
8WV1|1|A|U|1129
8WV1|1|A|A|1130
8WV1|1|A|A|1131
8WV1|1|A|A|1132
8WV1|1|A|G|1133
8WV1|1|A|A|1134
8WV1|1|A|G|1135
8WV1|1|A|U|1136
8WV1|1|A|G|1137
*
8WV1|1|A|C|1146
8WV1|1|A|U|1147
8WV1|1|A|C|1148
8WV1|1|A|A|1149
8WV1|1|A|C|1150

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36