J3_8WV1_016

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GCAUCC*GGUU*AUUAAAGC

Length

18 nucleotides

Bulged bases

8WV1|1|A|A|2530, 8WV1|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|G|2528
8WV1|1|A|C|2529
8WV1|1|A|A|2530
8WV1|1|A|U|2531
8WV1|1|A|C|2532
8WV1|1|A|C|2533
*
8WV1|1|A|G|2556
8WV1|1|A|G|2557
8WV1|1|A|U|2558
8WV1|1|A|U|2559
*
8WV1|1|A|A|2573
8WV1|1|A|U|2574
8WV1|1|A|U|2575
8WV1|1|A|A|2576
8WV1|1|A|A|2577
8WV1|1|A|A|2578
8WV1|1|A|G|2579
8WV1|1|A|C|2580

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L13

Chain J

Large ribosomal subunit protein uL14