J3_8WV1_021
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CCUCG*CGAUAGCGCACCAGUAC*GGAAAGG
- Length
- 29 nucleotides
- Bulged bases
- 8WV1|1|a|U|474, 8WV1|1|a|C|482
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|a|C|31
8WV1|1|a|C|32
8WV1|1|a|U|33
8WV1|1|a|C|34
8WV1|1|a|G|35
*
8WV1|1|a|C|471
8WV1|1|a|G|472
8WV1|1|a|A|473
8WV1|1|a|U|474
8WV1|1|a|A|475
8WV1|1|a|G|476
8WV1|1|a|C|477
8WV1|1|a|G|478
8WV1|1|a|C|479
8WV1|1|a|A|480
8WV1|1|a|C|481
8WV1|1|a|C|482
8WV1|1|a|A|483
8WV1|1|a|G|484
8WV1|1|a|U|485
8WV1|1|a|A|486
8WV1|1|a|C|487
*
8WV1|1|a|G|494
8WV1|1|a|G|495
8WV1|1|a|A|496
8WV1|1|a|A|497
8WV1|1|a|A|498
8WV1|1|a|G|499
8WV1|1|a|G|500
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain e
- 50S ribosomal protein L4
- Chain p
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L22
- Chain s
- 50S ribosomal protein L23
Coloring options: