J3_8Y0X_007

3D structure

PDB id

8Y0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dormant ribosome with SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0X|1|L5|A|2551
8Y0X|1|L5|G|2552
8Y0X|1|L5|A|2553
8Y0X|1|L5|U|2554
8Y0X|1|L5|G|2555
*
8Y0X|1|L5|C|2572
8Y0X|1|L5|A|2573
8Y0X|1|L5|G|2574
8Y0X|1|L5|U|2575
*
8Y0X|1|L5|A|2757
8Y0X|1|L5|G|2758
8Y0X|1|L5|G|2759
8Y0X|1|L5|G|2760
8Y0X|1|L5|U|2761
8Y0X|1|L5|G|2762
8Y0X|1|L5|U|2763
8Y0X|1|L5|A|2764
8Y0X|1|L5|A|2765
8Y0X|1|L5|A|2766
8Y0X|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27