J3_8Y6O_001
3D structure
- PDB id
- 8Y6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.38 Å
Loop
- Sequence
- GUUGCUA*UACUG*CACUC
- Length
- 17 nucleotides
- Bulged bases
- 8Y6O|1|J|G|22
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y6O|1|J|G|19
8Y6O|1|J|U|20
8Y6O|1|J|U|21
8Y6O|1|J|G|22
8Y6O|1|J|C|25
8Y6O|1|J|U|26
8Y6O|1|J|A|27
*
8Y6O|1|J|U|56
8Y6O|1|J|A|57
8Y6O|1|J|C|58
8Y6O|1|J|U|59
8Y6O|1|J|G|60
*
8Y6O|1|K|C|28
8Y6O|1|K|A|29
8Y6O|1|K|C|30
8Y6O|1|K|U|31
8Y6O|1|K|C|32
Current chains
- Chain J
- U4atac snRNA
- Chain K
- U6atac snRNA
Nearby chains
- Chain C
- Pre-mRNA-processing-splicing factor 8
- Chain H
- Thioredoxin-like protein 4B
- Chain L
- U4/U6 small nuclear ribonucleoprotein Prp31
- Chain N
- U4/U6 small nuclear ribonucleoprotein Prp3
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