J3_8ZEJ_021
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- AC*GAUAAGC*GAUUU
- Length
- 14 nucleotides
- Bulged bases
- 8ZEJ|1|b|U|72, 8ZEJ|1|b|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8ZEJ_021 not in the Motif Atlas
- Geometric match to J3_5J7L_037
- Geometric discrepancy: 0.1178
- The information below is about J3_5J7L_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
8ZEJ|1|b|A|56
8ZEJ|1|b|C|57
*
8ZEJ|1|b|G|70
8ZEJ|1|b|A|71
8ZEJ|1|b|U|72
8ZEJ|1|b|A|73
8ZEJ|1|b|A|74
8ZEJ|1|b|G|75
8ZEJ|1|b|C|76
*
8ZEJ|1|b|G|110
8ZEJ|1|b|A|111
8ZEJ|1|b|U|112
8ZEJ|1|b|U|113
8ZEJ|1|b|U|114
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain 6
- 50S ribosomal protein L34
- Chain u
- 50S ribosomal protein L23
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