J3_8ZEJ_025
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CCCAGACAGCCAGGAUGUUGG*CAUCAUUUAAAGAAAGC*GCUCACUGGUCGAG
- Length
- 52 nucleotides
- Bulged bases
- 8ZEJ|1|b|A|1046, 8ZEJ|1|b|U|1061, 8ZEJ|1|b|U|1078, 8ZEJ|1|b|A|1080, 8ZEJ|1|b|U|1083, 8ZEJ|1|b|G|1087, 8ZEJ|1|b|A|1103, 8ZEJ|1|b|C|1109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZEJ|1|b|C|1043
8ZEJ|1|b|C|1044
8ZEJ|1|b|C|1045
8ZEJ|1|b|A|1046
8ZEJ|1|b|G|1047
8ZEJ|1|b|A|1048
8ZEJ|1|b|C|1049
8ZEJ|1|b|A|1050
8ZEJ|1|b|G|1051
8ZEJ|1|b|C|1052
8ZEJ|1|b|C|1053
8ZEJ|1|b|A|1054
8ZEJ|1|b|G|1055
8ZEJ|1|b|G|1056
8ZEJ|1|b|A|1057
8ZEJ|1|b|U|1058
8ZEJ|1|b|G|1059
8ZEJ|1|b|U|1060
8ZEJ|1|b|U|1061
8ZEJ|1|b|G|1062
8ZEJ|1|b|G|1063
*
8ZEJ|1|b|C|1076
8ZEJ|1|b|A|1077
8ZEJ|1|b|U|1078
8ZEJ|1|b|C|1079
8ZEJ|1|b|A|1080
8ZEJ|1|b|U|1081
8ZEJ|1|b|U|1082
8ZEJ|1|b|U|1083
8ZEJ|1|b|A|1084
8ZEJ|1|b|A|1085
8ZEJ|1|b|A|1086
8ZEJ|1|b|G|1087
8ZEJ|1|b|A|1088
8ZEJ|1|b|A|1089
8ZEJ|1|b|A|1090
8ZEJ|1|b|G|1091
8ZEJ|1|b|C|1092
*
8ZEJ|1|b|G|1099
8ZEJ|1|b|C|1100
8ZEJ|1|b|U|1101
8ZEJ|1|b|C|1102
8ZEJ|1|b|A|1103
8ZEJ|1|b|C|1104
8ZEJ|1|b|U|1105
8ZEJ|1|b|G|1106
8ZEJ|1|b|G|1107
8ZEJ|1|b|U|1108
8ZEJ|1|b|C|1109
8ZEJ|1|b|G|1110
8ZEJ|1|b|A|1111
8ZEJ|1|b|G|1112
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
Coloring options: