J3_8ZEJ_033
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8ZEJ|1|b|A|2518, 8ZEJ|1|b|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8ZEJ_033 not in the Motif Atlas
- Geometric match to J3_5J7L_046
- Geometric discrepancy: 0.1275
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
8ZEJ|1|b|C|2517
8ZEJ|1|b|A|2518
8ZEJ|1|b|U|2519
8ZEJ|1|b|C|2520
*
8ZEJ|1|b|G|2545
8ZEJ|1|b|U|2546
8ZEJ|1|b|A|2547
*
8ZEJ|1|b|U|2561
8ZEJ|1|b|U|2562
8ZEJ|1|b|U|2563
8ZEJ|1|b|A|2564
8ZEJ|1|b|A|2565
8ZEJ|1|b|A|2566
8ZEJ|1|b|G|2567
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L14
Coloring options: