J3_8ZGR_011

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAC*GCUAAGG*CACC

Length

15 nucleotides

Bulged bases

8ZGR|1|LA|C|1256, 8ZGR|1|LA|U|1257, 8ZGR|1|LA|A|1258

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|G|1228
8ZGR|1|LA|G|1229
8ZGR|1|LA|A|1230
8ZGR|1|LA|C|1231
*
8ZGR|1|LA|G|1255
8ZGR|1|LA|C|1256
8ZGR|1|LA|U|1257
8ZGR|1|LA|A|1258
8ZGR|1|LA|A|1259
8ZGR|1|LA|G|1260
8ZGR|1|LA|G|1261
*
8ZGR|1|LA|C|1276
8ZGR|1|LA|A|1277
8ZGR|1|LA|C|1278
8ZGR|1|LA|C|1279

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains