J3_9AXU_012

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GGACG*CGCUAAGGAGUG*CUCACC

Length

23 nucleotides

Bulged bases

9AXU|1|2|A|1290, 9AXU|1|2|A|1294

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|G|1260
9AXU|1|2|G|1261
9AXU|1|2|A|1262
9AXU|1|2|C|1263
9AXU|1|2|G|1264
*
9AXU|1|2|C|1286
9AXU|1|2|G|1287
9AXU|1|2|C|1288
9AXU|1|2|U|1289
9AXU|1|2|A|1290
9AXU|1|2|A|1291
9AXU|1|2|G|1292
9AXU|1|2|G|1293
9AXU|1|2|A|1294
9AXU|1|2|G|1295
9AXU|1|2|U|1296
9AXU|1|2|G|1297
*
9AXU|1|2|C|1306
9AXU|1|2|U|1307
9AXU|1|2|C|1308
9AXU|1|2|A|1309
9AXU|1|2|C|1310
9AXU|1|2|C|1311

Current chains

Chain 2

28S ribosomal RNA

Nearby chains