J3_9AXU_025

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CCA*UAAUG*CAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|C|3399
9AXU|1|2|C|3400
9AXU|1|2|A|3401
*
9AXU|1|2|U|3415
9AXU|1|2|A|3416
9AXU|1|2|A|3417
9AXU|1|2|U|3418
9AXU|1|2|G|3419
*
9AXU|1|2|C|3489
9AXU|1|2|A|3490
9AXU|1|2|A|3491
9AXU|1|2|G|3492

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain b

Large ribosomal subunit protein uL22A

Chain p

Large ribosomal subunit protein eL31