J3_9B0Q_015

3D structure

PDB id

9B0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-back di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9B0Q|1|L5|U|2763

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0Q|1|L5|A|2551
9B0Q|1|L5|G|2552
9B0Q|1|L5|A|2553
9B0Q|1|L5|U|2554
9B0Q|1|L5|G|2555
*
9B0Q|1|L5|C|2572
9B0Q|1|L5|A|2573
9B0Q|1|L5|G|2574
9B0Q|1|L5|U|2575
*
9B0Q|1|L5|A|2757
9B0Q|1|L5|G|2758
9B0Q|1|L5|G|2759
9B0Q|1|L5|G|2760
9B0Q|1|L5|U|2761
9B0Q|1|L5|G|2762
9B0Q|1|L5|U|2763
9B0Q|1|L5|A|2764
9B0Q|1|L5|A|2765
9B0Q|1|L5|A|2766
9B0Q|1|L5|U|2767

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LZ

60S ribosomal protein L27