J3_9B0S_065

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

9B0S|1|l5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|l5|C|4970
9B0S|1|l5|A|4971
9B0S|1|l5|U|4972
*
9B0S|1|l5|G|4986
9B0S|1|l5|C|4987
9B0S|1|l5|U|4988
9B0S|1|l5|U|4989
9B0S|1|l5|C|4990
9B0S|1|l5|U|4991
*
9B0S|1|l5|A|5060
9B0S|1|l5|A|5061
9B0S|1|l5|G|5062
9B0S|1|l5|G|5063

Current chains

Chain l5

28S rRNA [Homo sapiens]

Nearby chains

Chain lB

Large ribosomal subunit protein uL3

Chain lP

60S ribosomal protein L17

Chain ld

60S ribosomal protein L31