J3_9B11_016

3D structure

PDB id

9B11 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9B11|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B11|1|L5|A|2551
9B11|1|L5|G|2552
9B11|1|L5|A|2553
9B11|1|L5|U|2554
9B11|1|L5|G|2555
*
9B11|1|L5|C|2572
9B11|1|L5|A|2573
9B11|1|L5|G|2574
9B11|1|L5|U|2575
*
9B11|1|L5|A|2757
9B11|1|L5|G|2758
9B11|1|L5|G|2759
9B11|1|L5|G|2760
9B11|1|L5|U|2761
9B11|1|L5|G|2762
9B11|1|L5|U|2763
9B11|1|L5|A|2764
9B11|1|L5|A|2765
9B11|1|L5|A|2766
9B11|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27