J3_9B24_021
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGUCCAUGAUGAAUCAGCGGUACUAACCAUCCAAAACCACCGU*GUUGGUGGGGCUGCAUGGGACCUUCGUUGGUAGUAGUCAAG*CGAG
- Length
- 88 nucleotides
- Bulged bases
- 9B24|1|Y|C|1534, 9B24|1|Y|A|1552, 9B24|1|Y|A|1566, 9B24|1|Y|G|1601, 9B24|1|Y|U|1620, 9B24|1|Y|G|1625, 9B24|1|Y|G|1626, 9B24|1|Y|U|1627, 9B24|1|Y|A|1628, 9B24|1|Y|G|1629
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B24|1|Y|C|1531
9B24|1|Y|G|1532
9B24|1|Y|U|1533
9B24|1|Y|C|1534
9B24|1|Y|C|1535
9B24|1|Y|A|1536
9B24|1|Y|U|1537
9B24|1|Y|G|1538
9B24|1|Y|A|1539
9B24|1|Y|U|1540
9B24|1|Y|G|1541
9B24|1|Y|A|1542
9B24|1|Y|A|1543
9B24|1|Y|U|1544
9B24|1|Y|C|1545
9B24|1|Y|A|1546
9B24|1|Y|G|1547
9B24|1|Y|C|1548
9B24|1|Y|G|1549
9B24|1|Y|G|1550
9B24|1|Y|U|1551
9B24|1|Y|A|1552
9B24|1|Y|C|1553
9B24|1|Y|U|1554
9B24|1|Y|A|1555
9B24|1|Y|A|1556
9B24|1|Y|C|1557
9B24|1|Y|C|1558
9B24|1|Y|A|1559
9B24|1|Y|U|1560
9B24|1|Y|C|1561
9B24|1|Y|C|1562
9B24|1|Y|A|1563
9B24|1|Y|A|1564
9B24|1|Y|A|1565
9B24|1|Y|A|1566
9B24|1|Y|C|1567
9B24|1|Y|C|1568
9B24|1|Y|A|1569
9B24|1|Y|C|1570
9B24|1|Y|C|1571
9B24|1|Y|G|1572
9B24|1|Y|U|1573
*
9B24|1|Y|G|1597
9B24|1|Y|U|1598
9B24|1|Y|U|1599
9B24|1|Y|G|1600
9B24|1|Y|G|1601
9B24|1|Y|U|1602
9B24|1|Y|G|1603
9B24|1|Y|G|1604
9B24|1|Y|G|1605
9B24|1|Y|G|1606
9B24|1|Y|C|1607
9B24|1|Y|U|1608
9B24|1|Y|G|1609
9B24|1|Y|C|1610
9B24|1|Y|A|1611
9B24|1|Y|U|1612
9B24|1|Y|G|1613
9B24|1|Y|G|1614
9B24|1|Y|G|1615
9B24|1|Y|A|1616
9B24|1|Y|C|1617
9B24|1|Y|C|1618
9B24|1|Y|U|1619
9B24|1|Y|U|1620
9B24|1|Y|C|1621
9B24|1|Y|G|1622
9B24|1|Y|U|1623
9B24|1|Y|U|1624
9B24|1|Y|G|1625
9B24|1|Y|G|1626
9B24|1|Y|U|1627
9B24|1|Y|A|1628
9B24|1|Y|G|1629
9B24|1|Y|U|1630
9B24|1|Y|A|1631
9B24|1|Y|G|1632
9B24|1|Y|U|1633
9B24|1|Y|C|1634
9B24|1|Y|A|1635
9B24|1|Y|A|1636
9B24|1|Y|G|1637
*
9B24|1|Y|C|1801
9B24|1|Y|G|1802
9B24|1|Y|A|1803
9B24|1|Y|G|1804
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain F
- Small ribosomal subunit protein bS6
- Chain K
- Small ribosomal subunit protein uS11
- Chain R
- Small ribosomal subunit protein bS18B
Coloring options: