J3_9B50_026

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAUGUUGG*CAUCAUUUAAAGAAA*UCAC

Length

28 nucleotides

Bulged bases

9B50|1|BA|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|1055
9B50|1|BA|G|1056
9B50|1|BA|A|1057
9B50|1|BA|U|1058
9B50|1|BA|G|1059
9B50|1|BA|U|1060
9B50|1|BA|U|1061
9B50|1|BA|G|1062
9B50|1|BA|G|1063
*
9B50|1|BA|C|1076
9B50|1|BA|A|1077
9B50|1|BA|U|1078
9B50|1|BA|C|1079
9B50|1|BA|A|1080
9B50|1|BA|U|1081
9B50|1|BA|U|1082
9B50|1|BA|U|1083
9B50|1|BA|A|1084
9B50|1|BA|A|1085
9B50|1|BA|A|1086
9B50|1|BA|G|1087
9B50|1|BA|A|1088
9B50|1|BA|A|1089
9B50|1|BA|A|1090
*
9B50|1|BA|U|1101
9B50|1|BA|C|1102
9B50|1|BA|A|1103
9B50|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36