J3_9B50_033

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

9B50|1|BA|U|2334, 9B50|1|BA|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|C|2295
9B50|1|BA|U|2296
9B50|1|BA|A|2297
9B50|1|BA|A|2298
9B50|1|BA|U|2299
*
9B50|1|BA|A|2317
9B50|1|BA|G|2318
9B50|1|BA|G|2319
9B50|1|BA|U|2320
9B50|1|BA|U|2321
9B50|1|BA|A|2322
9B50|1|BA|G|2323
*
9B50|1|BA|C|2332
9B50|1|BA|A|2333
9B50|1|BA|U|2334
9B50|1|BA|A|2335
9B50|1|BA|A|2336
9B50|1|BA|G|2337

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L5

Chain BO

50S ribosomal protein L18

Chain BW

50S ribosomal protein L27