3D structure

PDB id
9B50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GCCGUAG*CGC*GGAAC
Length
15 nucleotides
Bulged bases
9B50|1|BB|U|14, 9B50|1|BB|A|108
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B50|1|BB|G|10
9B50|1|BB|C|11
9B50|1|BB|C|12
9B50|1|BB|G|13
9B50|1|BB|U|14
9B50|1|BB|A|15
9B50|1|BB|G|16
*
9B50|1|BB|C|68
9B50|1|BB|G|69
9B50|1|BB|C|70
*
9B50|1|BB|G|106
9B50|1|BB|G|107
9B50|1|BB|A|108
9B50|1|BB|A|109
9B50|1|BB|C|110

Current chains

Chain BB
5S ribosomal RNA

Nearby chains

Chain BA
23S ribosomal RNA
Chain BO
50S ribosomal protein L18
Chain BV
50S ribosomal protein L25
Chain BW
50S ribosomal protein L27

Coloring options:

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