J3_9B51_010

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

9B51|1|AA|U|1212, 9B51|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9B51_010 not in the Motif Atlas

Geometric match to J3_8B0X_008

Geometric discrepancy: 0.0862

The information below is about J3_8B0X_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

9B51|1|AA|C|990
9B51|1|AA|U|991
9B51|1|AA|U|992
9B51|1|AA|G|993
*
9B51|1|AA|C|1045
9B51|1|AA|A|1046
9B51|1|AA|G|1047
*
9B51|1|AA|C|1210
9B51|1|AA|U|1211
9B51|1|AA|U|1212
9B51|1|AA|A|1213
9B51|1|AA|C|1214
9B51|1|AA|G|1215

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14