J3_9BDL_018

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9BDL|1|A28S|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|A|2551
9BDL|1|A28S|G|2552
9BDL|1|A28S|A|2553
9BDL|1|A28S|U|2554
9BDL|1|A28S|G|2555
*
9BDL|1|A28S|C|2572
9BDL|1|A28S|A|2573
9BDL|1|A28S|G|2574
9BDL|1|A28S|U|2575
*
9BDL|1|A28S|A|2757
9BDL|1|A28S|G|2758
9BDL|1|A28S|G|2759
9BDL|1|A28S|G|2760
9BDL|1|A28S|U|2761
9BDL|1|A28S|G|2762
9BDL|1|A28S|U|2763
9BDL|1|A28S|A|2764
9BDL|1|A28S|A|2765
9BDL|1|A28S|A|2766
9BDL|1|A28S|U|2767

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL27

60S ribosomal protein L27