J3_9BH5_001
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CAGCG*CGUAUAG*CUUGG
- Length
- 17 nucleotides
- Bulged bases
- 9BH5|1|A5|U|157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|A5|C|112
9BH5|1|A5|A|113
9BH5|1|A5|G|114
9BH5|1|A5|C|115
9BH5|1|A5|G|116
*
9BH5|1|A5|C|153
9BH5|1|A5|G|154
9BH5|1|A5|U|155
9BH5|1|A5|A|156
9BH5|1|A5|U|157
9BH5|1|A5|A|158
9BH5|1|A5|G|159
*
9BH5|1|A5|C|269
9BH5|1|A5|U|270
9BH5|1|A5|U|271
9BH5|1|A5|G|272
9BH5|1|A5|G|273
Current chains
- Chain A5
- 28S rRNA
Nearby chains
- Chain CG
- Large ribosomal subunit protein eL8
- Chain CL
- Large ribosomal subunit protein eL13
- Chain CN
- Large ribosomal subunit protein eL15
- Chain Ch
- Large ribosomal subunit protein uL29
- Chain Ci
- Large ribosomal subunit protein eL36
Coloring options: