J3_9BH5_011
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CUCG*CAUCC*GAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|B2|C|1002
9BH5|1|B2|U|1003
9BH5|1|B2|C|1004
9BH5|1|B2|G|1005
*
9BH5|1|B2|C|1037
9BH5|1|B2|A|1039
9BH5|1|B2|U|1040
9BH5|1|B2|C|1041
9BH5|1|B2|C|1042
*
9BH5|1|B2|G|1049
9BH5|1|B2|A|1050
9BH5|1|B2|A|1051
9BH5|1|B2|A|1052
9BH5|1|B2|G|1053
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AA
- Small ribosomal subunit protein uS2
- Chain AV
- Small ribosomal subunit protein eS21
- Chain AW
- Ribosomal Protein, Small subunit
- Chain Aa
- Small ribosomal subunit protein eS26
- Chain Ab
- Small ribosomal subunit protein eS27
Coloring options: